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Project setup station vs ABBYY Flexicapture SDK

Hi community,

       How is processing a file in project setup station (drag-and-drop files into project setup station) different from processing a file through flexicapture SDK? 

 My problem is when I run a file through project setup station, I'm able to get the output for the confidence level script which I have included in the rules. However, I am getting a 0 value in the fields when I run it through Abbyy flexicapture SDK.

 

What am I missing here?

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